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These probe sets differ in number and composition, depending on the types of questions we are asking and the taxa with which we are working. Mc Cormack JE, Faircloth BC, Crawford NG, Gowaty PA, Brumfield RT, Glenn TC. Ultraconserved Elements Are Novel Phylogenomic Markers that Resolve Placental Mammal Phylogeny when Combined with Species Tree Analysis. Slides are available for each talk by clicking on the linked talk title.
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UCEs were first described in a wonderful manuscript by Gil Bejerano et al.
(2004) from David Haussler’s group and subsequently identified in several classes of organisms outside the group of original taxa (Siepel et al. The 27-way vertebrate genome alignment (Miller et al.
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